Results for ' the Tree of Life'

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  1. The Tree of Life: Philosophical and Theological Considerations.Lucio Florio - manuscript
    Abstract: Biology continues to use the Tree of Life image to show the temporal continuity and discontinuity of the living beings. Moreover, the development of genetic, molecular biology and paleontology has originated phylogenetics. This discipline studies evolutionary relatedness among various groups of organisms through molecular sequencing data and morphological data matrices. The Tree offers interesting points for semiotic perspectives and for theological approaches too. The symbolic reading of the Tree of Life, on the one hand, (...)
     
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  2.  18
    The Tree of Life, Health, and Risk Through the Lens of Biblical Wisdom.Bradley C. Gregory - 2023 - Christian Bioethics 29 (2):129-140.
    As a way forward in assessing how the Old Testament wisdom tradition might speak to decisions in a modern medical context, in this paper, I propose exploring the iconographic function of the “tree of life” in the Old Testament, which is consistently associated with both wisdom as well as life and health, in order to tease out two-related issues that can help in providing a Christian theological framework for thinking about the problem of the medicalization of risk: (...)
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  3. The tree of life: introduction to an evolutionary debate. [REVIEW]Maureen A. O’Malley, William Martin & John Dupré - 2010 - Biology and Philosophy 25 (4):441-453.
    The ‘Tree of Life’ is intended to represent the pattern of evolutionary processes that result in bifurcating species lineages. Often justified in reference to Darwin’s discussions of trees, the Tree of Life has run up against numerous challenges especially in regard to prokaryote evolution. This special issue examines scientific, historical and philosophical aspects of debates about the Tree of Life, with the aim of turning these criticisms towards a reconstruction of prokaryote phylogeny and even (...)
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  4. Pruning the tree of life.Karen Neander - 1995 - British Journal for the Philosophy of Science 46 (1):59-80.
    argue that natural selection does not explain the genotypic arid phenotypic properties of individuals. On this view, natural selection explains the adaptedness of individuals, not by explaining why the individuals that exist have the adaptations they do, but rather by explaining why the individuals that exist are the ones with those adaptations. This paper argues that this ‘Negative’ view of natural selection ignores the fact that natural selection is a cumulative selection process. So understood, it explains how the genetic sequences (...)
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  5. Depicting the tree of life: The philosophical and historical roots of evolutionary tree diagrams.Nathalie Gontier - 2011 - Evolution, Education and Outreach 3 (4):515-38.
  6. The Tree of Life: Agency and Immortality in a Metaphysics Inspired by Quantum Theory.Peter Forrest - 2007 - In Peter van Inwagen and Dean Zimmerman (ed.), Persons: Human and Divine. Oxford University Press. pp. 245-253.
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  7.  28
    The tree of life describes a tripartite cellular world.Arshan Nasir, Fizza Mughal & Gustavo Caetano-Anollés - 2021 - Bioessays 43 (6):2000343.
    The canonical view of a 3‐domain (3D) tree of life was recently challenged by the discovery of Asgardarchaeota encoding eukaryote signature proteins (ESPs), which were treated as missing links of a 2‐domain (2D) tree. Here we revisit the debate. We discuss methodological limitations of building trees with alignment‐dependent approaches, which often fail to satisfactorily address the problem of ‘‘gaps.’’ In addition, most phylogenies are reconstructed unrooted, neglecting the power of direct rooting methods. Alignment‐free methodologies lift most difficulties (...)
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  8.  1
    The tree of life.Aaron ben Elijah - 1949 - [New York?: [New York?. Edited by Morris, [From Old Catalog] & Charner.
  9. The Tree of Life: Studies in the History of Religions.E. O. James - 1968 - Religious Studies 3 (2):571-573.
     
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  10.  75
    Biodiversity Realism: Preserving the tree of life.Christopher Hunter Lean - 2017 - Biology and Philosophy 32 (6):1083-1103.
    Biodiversity is a key concept in the biological sciences. While it has its origin in conservation biology, it has become useful across multiple biological disciplines as a means to describe biological variation. It remains, however, unclear what particular biological units the concept refers to. There are currently multiple accounts of which biological features constitute biodiversity and how these are to be measured. In this paper, I draw from the species concept debate to argue for a set of desiderata for the (...)
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  11.  15
    The Tree of Life describes a tripartite cellular world: Neglected support from genome structure and codon usage and the fallacy of alignment‐dependent phylogenetic interpretations.Gustavo Caetano-Anollés & Fizza Mughal - 2021 - Bioessays 43 (8):2100130.
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  12.  18
    The Tree of Life.Brock Bahler - 2019 - Philosophy in the Contemporary World 25 (1):107-120.
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  13.  22
    The tree of life and the rock of ages: Are we getting better at estimating phylogeny?Matthew A. Wills - 2002 - Bioessays 24 (3):203-207.
    In a recent paper,(1) palaeontologist Mike Benton claimed that our ability to reconstruct accurately the tree of Life may not have improved significantly over the last 100 years. This implies that the cladistic and molecular revolutions may have promulgated as much bad “black box” science as rigorous investigation. Benton's assessment was based on the extent to which cladograms (typically constructed with reference only to distributions of character states) convey the same narrative as the geochronological ages of fossil taxa (...)
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  14.  31
    Is something wrong with the tree of life?William F. Martin - 1996 - Bioessays 18 (7):523-527.
    A recent study(1) of sequence data from many different proteins has suggested that contemporary prokaryotes and eukaryotes may have shared a common ancestor as recently as 2 billion years ago (the molecular clock). Strong evidence from the geological record, however, indicates that oxygen‐producing microorganisms, perhaps similar to modern cyanobacteria, existed 3.5 billion years ago. The fossil evidence, therefore, suggests that any common ancestor of prokaryotes and eukaryotes must have existed at least 1.5 billion years earlier than suggested by the molecular (...)
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  15.  8
    Naming the Tree of Life.David Jones - 2018 - Comparative and Continental Philosophy 10 (3):201-202.
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  16. The tree of life in jewish iconography.Zofja Ameisenowa & W. F. Mainland - 1939 - Journal of the Warburg Institute 2 (4):326-345.
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  17.  65
    The Tree of Life Written and Directed by Terrence Malick, Palme d’Or, Cannes 2011: Where Wast Thou When I Laid the Foundations of the Earth? Declare It If Thou Hast Understanding Job, 38.4.Patrick Hutchings - 2012 - Sophia 51 (1):137-138.
  18.  10
    What is the Connection Between the Tree of Life and Logic?Daniel Shorkend - 2023 - European Journal of Theology and Philosophy 3 (3):11-15.
    In this essay, I explore the relationship between the kabbalistic Tree of Life and that of Logic. I begin defining my terms, then analyze the question posed through that of science; philosophy; art and the concept of knowledge in general. I conclude that while a unified and complete account of knowledge cannot be gained, one can get a semblance of this knowledge. This I call a tending towards infinity or more precisely – a calculus of infinity. I conjecture (...)
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  19.  81
    Ernst Mayr, the tree of life, and philosophy of biology.Maureen A. O’Malley - 2010 - Biology and Philosophy 25 (4):529-552.
    Ernst Mayr’s influence on philosophy of biology has given the field a particular perspective on evolution, phylogeny and life in general. Using debates about the tree of life as a guide, I show how Mayrian evolutionary biology excludes numerous forms of life and many important evolutionary processes. Hybridization and lateral gene transfer are two of these processes, and they occur frequently, with important outcomes in all domains of life. Eukaryotes appear to have a more (...)-like history because successful lateral events tend to occur among more closely related species, or at a lower frequency, than in prokaryotes, but this is a difference of degree rather than kind. Although the tree of life is especially problematic as a representation of the evolutionary history of prokaryotes, it can function more generally as an illustration of the limitations of a standard evolutionary perspective. Moreover, for philosophers, questions about the tree of life can be applied to the Mayrian inheritance in philosophy of biology. These questions make clear that the dichotomy of life Mayr suggested is based on too narrow a perspective. An alternative to this dichotomy is a multidimensional continuum in which different strategies of genetic exchange bestow greater adaptiveness and evolvability on prokaryotes and eukaryotes. (shrink)
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  20. Species, Genes, and the Tree of Life.Joel D. Velasco - 2010 - British Journal for the Philosophy of Science 61 (3):599-619.
    A common view is that species occupy a unique position on the Tree of Life. Evaluating this claim requires an understanding of what the Tree of Life represents. The Tree represents history, but there are at least three biological levels that are often said to have genealogies: species, organisms, and genes. Here I focus on defending the plausibility of a gene-based account of the Tree. This leads to an account of species that are determined (...)
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  21.  32
    Esoteric Symbolism of the ‘Tree of Life’: A Cross-cultural Perspective.Relic Ratka - 2017 - Journal of Human Values 23 (2):73-80.
    The article reviews about esoteric symbolism of the tree of life in shamanic cultures and oriental traditions including classical Hindu and Buddhist systems, together with various esoteric and indigenous traditions. The very idea of the tree of life, in indigenous cultures, which is often called the ‘world tree’ or ‘shamanic tree’, is connected with human illumination process in the form of mystical or ecstatic experience gained through the process of the self-realization. These various forms (...)
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  22.  25
    Chapter Seven. Species and the Tree of Life.Peter Godfrey-Smith - 2013 - In Philosophy of Biology. Princeton: Princeton University Press. pp. 100-119.
  23. Special issue on the tree of life (15 papers).M. A. O'Malley - 2010 - Biology and Philosophy 25 (4).
     
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  24.  55
    Evidence, content and corroboration and the tree of life.E. Kurt Lienau & Rob DeSalle - 2009 - Acta Biotheoretica 57 (1-2):187–199.
    We examine three critical aspects of Popper’s formulation of the ‘ Logic of Scientific Discovery ’—evidence, content and degree of corroboration—and place these concepts in the context of the Tree of Life (ToL) problem with particular reference to molecular systematics. Content, in the sense discussed by Popper, refers to the breadth and scope of existence that a hypothesis purports to explain. Content, in conjunction with the amount of available and relevant evidence, determines the testability, or potential degree of (...)
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  25.  19
    Tree of life, tree of knowledge: conversations with the Torah.Michael Rosenak - 2001 - Boulder, Colo.: Westview Press.
    Viewing education through the prism of the Torah, Tree of Life, Tree of Knowledge takes the reader through the stages of learning, growth, and self-development that characterize human lives. The journey begins with education as it happens in the home, moves on to the institutions of society, especially schools, and then on to the questions of identity and commitment which constitute the hidden agenda of “informal educational networks.” The self-education of the individual is explored: When does one (...)
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  26.  84
    The attempt on the life of the Tree of Life: science, philosophy and politics.W. Ford Doolittle - 2010 - Biology and Philosophy 25 (4):455-473.
    Lateral gene transfer, the exchange of genetic information between lineages, not only makes construction of a universal Tree of Life difficult to achieve, but calls into question the utility and meaning of any result. Here I review the science of prokaryotic LGT, the philosophy of the TOL as it figured in Darwin’s formulation of the Theory of Evolution, and the politics of the current debate within the discipline over how threats to the TOL should be represented outside it. (...)
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  27.  69
    When integration fails: Prokaryote phylogeny and the tree of life.Maureen A. O’Malley - 2013 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 44 (4a):551-562.
    Much is being written these days about integration, its desirability and even its necessity when complex research problems are to be addressed. Seldom, however, do we hear much about the failure of such efforts. Because integration is an ongoing activity rather than a final achievement, and because today’s literature about integration consists mostly of manifesto statements rather than precise descriptions, an examination of unsuccessful integration could be illuminating to understand better how it works. This paper will examine the case of (...)
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  28. Lifeness signatures and the roots of the tree of life.Christophe Malaterre - 2010 - Biology and Philosophy 25 (4):643-658.
    Do trees of life have roots? What do these roots look like? In this contribution, I argue that research on the origins of life might offer glimpses on the topology of these very roots. More specifically, I argue (1) that the roots of the tree of life go well below the level of the commonly mentioned ‘ancestral organisms’ down into the level of much simpler, minimally living entities that might be referred to as ‘protoliving systems’, and (...)
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  29.  46
    Universal common ancestry, LUCA, and the Tree of Life: three distinct hypotheses about the evolution of life.Joel Velasco - 2018 - Biology and Philosophy 33 (5-6):31.
    Common ancestry is a central feature of the theory of evolution, yet it is not clear what “common ancestry” actually means; nor is it clear how it is related to other terms such as “the Tree of Life” and “the last universal common ancestor”. I argue these terms describe three distinct hypotheses ordered in a logical way: that there is a Tree of Life is a claim about the pattern of evolutionary history, that there is a (...)
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  30.  3
    The ageing virus hypothesis: Epigenetic ageing beyond the Tree of Life.Éric Bapteste - 2025 - Bioessays 47 (1):2400099.
    A recent thought‐provoking theory argues that complex organisms using epigenetic information for their normal development and functioning must irreversibly age as a result of epigenetic signal loss. Importantly, the scope of this theory could be considerably expanded, with scientific benefits, by analyzing epigenetic ageing beyond the borders of the Tree of Life. Viruses that use epigenetic signals for their normal functioning may also age, that is, present an increasing risk of failing to complete their individual life cycle (...)
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  31.  37
    Jacob's Ladder and the Tree of Life: Concepts of Hierarchy and the Great Chain of Being.Marion Leathers Kuntz & Paul Grimley Kuntz - 1987 - Peter Lang Incorporated, International Academic Publishers.
    The Great Chain of Being has been recognized for fifty years as the masterpiece of the History of Ideas movement in America. Lovejoy's work stimulated deeper research into our heritage, which has demonstrated that the idea of the chain of being has not lost its vitality. However, Lovejoy would probably be surprised that hierarchy is now defended in philosophy of science, in ontology and metaphysics, in ethics and aesthetics, and in philosophical anthropology. This volume presents concepts of hierarchy and the (...)
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  32.  28
    Tree of Letters, “Tree of Life:” How a Letter of the Torah Can Transform (the Human Being Made in) the Image of God1.Charlotte Berkowitz - 2005 - The European Legacy 10 (7):703-716.
    Venerable tradition allies the Torah with Wisdom, a “tree of life.”2 The tree of life is an ancient mythic symbol of the earth mother. This essay demonstrates the capacity of the Torah to facilitate a reintegrative return to the mother when, as now, the religious narratives falter that once seemed to ensure the unity of man made in the image of God conceived only as the Father. Participating in the process of this return one discovers beneath (...)
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  33. Tree of Life, in the Origins of Writing.Jean Chevalier & Alain Gheerbrant - 2000 - Zygon 35 (1).
     
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  34.  52
    Faith, sacrifice, and the earth's glory in Terrence malick's the tree of life.George B. Handley - 2014 - Angelaki 19 (4):79-93.
    :Terrence Malick's film The Tree of Life revisits many of the questions regarding a Christian theodicy. How, for example, can one reconcile the idea of providence or believe in the meaning of human suffering when life itself is subject to and even dependent on chance and violence? In order to sustain faith in providence in such a universe, Malick suggests that one must be willing to absorb the insults of accident and sacrifice the human drive to control (...)
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  35.  7
    The tree of nature: the essence of nature is information & communication.F. H. Wöhlbier - 2013 - Zurich-Durnten: TTP, Trans Tech Publications.
    The Tree of Nature represents an IT-based approach to understanding Nature in the light of present-day scientific knowledge. The universe, in this view, consists of discrete entities; these are not material particles, however, but information processing events that produce observable changes in the world. The surprising result of this analysis is that the workings of Nature are based on a decision tree consisting of two dozen parameters. The tree is similar to the evolutionary phylogenetic system of the (...)
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  36.  40
    Drawing the tree of life: J. David Archibald: Aristotle’s ladder, Darwin’s tree: The evolution of visual metaphors for biological order. New York: Columbia University Press, 2014, 256 pp, US$65.00/£45.00 HB. [REVIEW]John S. Wilkins - 2016 - Metascience 25 (3):421-424.
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  37.  22
    (1 other version)The Persistence of Memory: The Questfor Human Origins and Destiny in Andrey Bely's Kotik Letaev and Terrence Malick's The Tree of Life.Albert Paretsky - 2016 - New Blackfriars 97 (1072).
    Andrey Bely's autobiographical novel Kotik Letaev and Terrence Malick's film The Tree of Life do not share a common subtext. Nevertheless, they have strikingly similar themes. They each deal with an adult's confrontation of his past through memory, a memory that extends back before birth. Coming to terms with the past prepares the adult protagonist of each work for his destiny. The essay discusses Malick's use of William Blake's mysticism and Bely's dependence on the religious-philosophical ideas of Rudolf (...)
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  38.  28
    Lithbea, a New Domain Outside the Tree of Life.Jaime Gómez-Márquez - 2023 - Global Philosophy 33 (1):1-19.
    At this time when the development of synthetic biology and artificial intelligence are changing the world around us, philosophers and scientists, first of all, must converge to analyze the present and predict the ethical-social consequences and biological dangers associated with new “living entities” that are not the result of the natural evolutionary process. As synthetic/artificial life forms (xenobots, robots, transgenic organisms, etc.) become more and more abundant and sophisticated, it seems first of all necessary to bring some order to (...)
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  39.  32
    Synergy of Energy and Semiosis: Cooperation Climbs the Tree of Life.Eliseo Fernández - 2016 - Biosemiotics 9 (3):383-397.
    The course of biological evolution is regarded by many authors as an ascending path toward higher levels of variety, complexity and integration. There are similar but partly conflicting accounts of the nature and causes of this ascending course. With the aim of reaching a unified conception I start by summarily reviewing three notable examples. These are, in their latest presentations, those of Hoffmeyer and Stjernfelt 2015, Szathmáry 2015, and Lane 2015a. Comparison of their commonalities and divergences, combined with further reflections, (...)
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  40.  24
    The Route from the Tree of Knowledge to the Tree of Life.Emanuel Gruengard - 2008 - Proceedings of the Xxii World Congress of Philosophy 48:33-41.
    The computer is more then a mere machine. Starting with questions of Intelligence, Artificial Intelligence and Neural Network we proceeded to Artificial Life. This new science raises fear and doubts which are similar to other historical intolerances and fears, mainly concerned with the progression of science and technology that littered our history. Yet Artificial Life is different as it addresses directly the fate of our race. Some consider it as its salvation, while others see it as its annihilator. (...)
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  41.  28
    Environmental Violence and Natural Symbolism in Chava Rosenfarb's The Tree of Life : An Ecocritical Approach to Holocaust Memory.Ariane Santerre - 2023 - Environment, Space, Place 15 (2):136-162.
    Future prize-winning writer Chava Rosenfarb was seventeen years old when she was incarcerated in the Łódź ghetto. In 1972, she published The Tree of Life [Der boym fun lebn] (1972), a fictional chronicle of that experience of the Holocaust. In this three-volume epic novel, Rosenfarb narrates and interlaces the fates of ten Jewish families from pre-war Poland in 1939 to the liquidation of the ghetto in 1944. The "Tree of Life" is revealed to be the name (...)
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  42. Mirror neurons in the tree of life: mosaic evolution, plasticity and exaptation of sensorimotor matching responses.Antonella Tramacere & Pier Francesco Ferrari - 2016 - Biological Reviews 92 (3):1819-1841.
    Considering the properties of mirror neurons (MNs) in terms of development and phylogeny, we offer a novel, unifying, and testable account of their evolution according to the available data and try to unify apparently discordant research, including the plasticity of MNs during development, their adaptive value and their phylogenetic relationships and continuity. We hypothesize that the MN system reflects a set of interrelated traits, each with an independent natural history due to unique selective pressures, and propose that there are at (...)
     
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  43.  15
    Tree of Life Motif, Late Bronze Canaanite Cult, and a Recently Discovered Krater from Tel Burna.Christian Locatell, Chris McKinny & Itzhaq Shai - 2022 - Journal of the American Oriental Society 142 (3):573-596.
    This paper discusses a krater recently discovered in a cultic building at Tel Burna in the Shephelah. Of special interest is the krater’s relatively well-preserved decoration containing multiple nature scenes related to the so-called tree of life or sacred tree motif. The krater’s physical description and archaeological context and the decoration’s relationship to relevant comparanda are explored in order to elucidate the significance of its iconography. In light of this discussion, we conclude that the decoration includes an (...)
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  44.  35
    Film as Ethical Philosophy and the Question of Philosophical Arguments in Film: A Reading of The Tree of Life.Shawn Loht - 2014 - Film and Philosophy 18:164-183.
    Responds to the seminal claim of Bruce Russell that films cannot present philosophical arguments. Provides a reading of The Tree of Life (Terrence Malick, 2011) in order to illustrate how this film presents an environmental ethics argument. Some reference to the environmental philosophy of Holmes Rolston III as well as Martin Heidegger.
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  45.  18
    Trees of life: a visual history of evolution.Theodore W. Pietsch - 2012 - Baltimore: Johns Hopkins University Press.
    Brackets and tables, circles and maps, 1554-1872 -- Early botanical networks and trees, 1766-1815 -- The first evolutionary tree, 1786-1820 -- Diverse and unusual trees of the early nineteenth century, 1817-1834 -- The rule of five, 1819-1854 -- Pre-Darwinian branching diagrams, 1828-1858 -- Evolution and the trees of Charles Darwin, 1837-1868 -- The trees of Ernst Haeckel, 1866-1905 -- Post-Darwinian nonconformists, 1868-1896 -- More late-nineteenth-century trees, 1874-1897 -- Trees of the early twentieth century, 1901-1930 -- The trees of Alfred (...)
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  46.  98
    Edward Hitchcock’s Pre-Darwinian “Tree of Life”.J. David Archibald - 2009 - Journal of the History of Biology 42 (3):561-592.
    The "tree of life" iconography, representing the history of life, dates from at least the latter half of the 18th century, but evolution as the mechanism providing this bifurcating history of life did not appear until the early 19th century. There was also a shift from the straight line, scala naturae view of change in nature to a more bifurcating or tree-like view. Throughout the 19th century authors presented tree-like diagrams, some regarding the Deity (...)
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  47.  50
    Paul Klee: Trees and the Art of Life.Claudia Baracchi - 2013 - Research in Phenomenology 43 (3):340-365.
    The artist understands his work as intimately connected with the life and symbolism of plants. Art, thus, demands an attunement to life’s elemental operations, the thrust “into dimensions far removed from the conscious process.” The first part of the present essay aims at recovering what is implied in the imagery of trees, delving into ancient archives of dormant collective memories and immemorial imaginal stratifications. The second and third parts, deploying the re-energized figure of the tree, explore the (...)
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  48.  1
    (1 other version)A tree of life: diversity, flexibility, and creativity in Jewish law.Louis Jacobs - 1984 - New York: Published for the Littman Library by Oxford University Press.
    This study of the Jewish legal system (the Halakhah) demonstrates that the law embraces every corner of life.
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  49.  19
    Derrida, deconstructionism and Nietzsche: The tree of knowledge and the tree of life.Bernard Zelechow - 1989 - History of European Ideas 11 (1-6):901-905.
  50.  11
    Derekh ʻets ha-ḥayim: ʻolam ḥadash memashmesh u-va = The way of the tree of life: a new world is drawing near.Dov Berkovits - 2021 - Yerushalayim: Karmel.
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