Results for 'Colin Batchelor'

963 found
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  1.  58
    The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data.Robert Hoehndorf, Colin Batchelor, Thomas Bittner, Michel Dumontier, Karen Eilbeck, Rob Knight, Chris J. Mungall, Jane S. Richardson, Jesse Stombaugh & Eric Westhof - 2011 - Applied ontology 6 (1):53-89.
    Biomedical Ontologies integrate diverse biomedical data and enable intelligent data-mining and help translate basic research into useful clinical knowledge. We present the RNA Ontology (RNAO), an o...
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  2.  12
    Buddhism Without Beliefs. Stephen Batchelor.Colin Edwards - 1999 - Buddhist Studies Review 16 (2):246-250.
    Buddhism Without Beliefs. Stephen Batchelor. Bloomsbury, London 1998. 127 pp. £9.99. ISBN 0 7475 3769 0.
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  3. Behavioral game theory: Plausible formal models that predict accurately.Colin F. Camerer - 2003 - Behavioral and Brain Sciences 26 (2):157-158.
    Many weaknesses of game theory are cured by new models that embody simple cognitive principles, while maintaining the formalism and generality that makes game theory useful. Social preference models can generate team reasoning by combining reciprocation and correlated equilibrium. Models of limited iterated thinking explain data better than equilibrium models do; and they self-repair problems of implausibility and multiplicity of equilibria.
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  4. Two Kinds of Unity in the Critique of Pure Reason.Colin McLear - 2015 - Journal of the History of Philosophy 53 (1):79-110.
    I argue that Kant’s distinction between the cognitive roles of sensibility and understanding raises a question concerning the conditions necessary for objective representation. I distinguish two opposing interpretive positions—viz. Intellectualism and Sensibilism. According to Intellectualism all objective representation depends, at least in part, on the unifying synthetic activity of the mind. In contrast, Sensibilism argues that at least some forms of objective representation, specifically intuitions, do not require synthesis. I argue that there are deep reasons for thinking that Intellectualism is (...)
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  5.  41
    Collected Papers.Colin McGinn - 1988 - Philosophical Review 97 (2):278.
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  6. Kant on Perceptual Content.Colin McLear - 2016 - Mind 125 (497):95-144.
    Call the idea that states of perceptual awareness have intentional content, and in virtue of that aim at or represent ways the world might be, the ‘Content View.’ I argue that though Kant is widely interpreted as endorsing the Content View there are significant problems for any such interpretation. I further argue that given the problems associated with attributing the Content View to Kant, interpreters should instead consider him as endorsing a form of acquaintance theory. Though perceptual acquaintance is controversial (...)
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  7. On the Transcendental Freedom of the Intellect.Colin McLear - 2020 - Ergo: An Open Access Journal of Philosophy 7:35-104.
    Kant holds that the applicability of the moral ‘ought’ depends on a kind of agent-causal freedom that is incompatible with the deterministic structure of phenomenal nature. I argue that Kant understands this determinism to threaten not just morality but the very possibility of our status as rational beings. Rational beings exemplify “cognitive control” in all of their actions, including not just rational willing and the formation of doxastic attitudes, but also more basic cognitive acts such as judging, conceptualizing, and synthesizing.
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  8. Justice in Ideal Theory: A Refutation.Colin Farrelly - unknown
    Political philosophers have recently begun to take seriously methodological questions concerning what a theoretical examination of political ideals is suppose to accomplish and how effective theorising in ideal theory is in securing those aims. Andrew Mason and G.A. Cohen, for example, believe that the fundamental principles of justice are logically independent of issues of feasibility and questions about human nature. Their position contrasts sharply with political theorists like John Dunn and Joseph Carens who believe that normative theorising must be integrated (...)
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  9. An Imperative Theory of Pain.Colin Klein - 2007 - Journal of Philosophy 104 (10):517-532.
    forthcoming in The Journal of Philosophy.
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  10. What do predictive coders want?Colin Klein - 2018 - Synthese 195 (6):2541-2557.
    The so-called “dark room problem” makes vivd the challenges that purely predictive models face in accounting for motivation. I argue that the problem is a serious one. Proposals for solving the dark room problem via predictive coding architectures are either empirically inadequate or computationally intractable. The Free Energy principle might avoid the problem, but only at the cost of setting itself up as a highly idealized model, which is then literally false to the world. I draw at least one optimistic (...)
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  11. Kant on Animal Consciousness.Colin McLear - 2011 - Philosophers' Imprint 11.
    Kant is often considered to have argued that perceptual awareness of objects in one's environment depends on the subject's possession of conceptual capacities. This conceptualist interpretation raises an immediate problem concerning the nature of perceptual awareness in non-rational, non-concept using animals. In this paper I argue that Kant’s claims concerning animal representation and consciousness do not foreclose the possibility of attributing to animals the capacity for objective perceptual consciousness, and that a non-conceptualist interpretation of Kant’s position concerning perceptual awareness can (...)
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  12. The Collapse of Logical Pluralism has been Greatly Exaggerated.Colin R. Caret - 2017 - Erkenntnis 82 (4):739-760.
    According to the logical pluralism of Beall and Restall, there are several distinct relations of logical consequence. Some critics argue that logical pluralism suffers from what I call the collapse problem: that despite its intention to articulate a radically pluralistic doctrine about logic, the view unintentionally collapses into logical monism. In this paper, I propose a contextualist resolution of the collapse problem. This clarifies the mechanism responsible for a plurality of logics and handles the motivating data better than the original (...)
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  13. The Kantian (Non)‐conceptualism Debate.Colin McLear - 2014 - Philosophy Compass 9 (11):769-790.
    One of the central debates in contemporary Kant scholarship concerns whether Kant endorses a “conceptualist” account of the nature of sensory experience. Understanding the debate is crucial for getting a full grasp of Kant's theory of mind, cognition, perception, and epistemology. This paper situates the debate in the context of Kant's broader theory of cognition and surveys some of the major arguments for conceptualist and non-conceptualist interpretations of his critical philosophy.
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  14. What Pain Asymbolia Really Shows.Colin Klein - 2015 - Mind 124 (494):493-516.
    Pain asymbolics feel pain, but act as if they are indifferent to it. Nikola Grahek argues that such patients present a clear counterexample to motivationalism about pain. I argue that Grahek has mischaracterized pain asymbolia. Properly understood, asymbolics have lost a general capacity to care about their bodily integrity. Asymbolics’ indifference to pain thus does not show something about the intrinsic nature of pain ; it shows something about the relationship between pains and subjects, and how that relationship might break (...)
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  15. Political persuasion is prima facie disrespectful.Colin Marshall - forthcoming - Journal of Moral Philosophy.
    Political persuasion can express moral respect. In this article, however, I rely on two psychological assumptions to argue that political persuasion is generally prima facie disrespectful: (1) that we maintain our political beliefs largely for non-epistemic, personal reasons and (2) that our political beliefs are connected to our epistemic esteem. Given those assumptions, a persuader can either ignore the relevant personal reasons, explicitly address them, or implicitly address them. Ignoring those reasons, I argue, constitutes prima facie insensitivity. Explicitly addressing them (...)
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  16. Cognitive Ontology and Region- versus Network-Oriented Analyses.Colin Klein - 2012 - Philosophy of Science 79 (5):952-960.
    The interpretation of functional imaging experiments is complicated by the pluripotency of brain regions. As there is a many-to-one mapping between cognitive functions and their neural substrates, region-based analyses of imaging data provide only weak support for cognitive theories. Price and Friston argue that we need a ‘cognitive ontology’ that abstractly categorizes the function of regions. I argue that abstract characterizations are unlikely to be cognitively interesting. I argue instead that we should attribute functions to regions in a context-sensitive manner. (...)
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  17. Imperativism and Pain Intensity.Colin Klein & Manolo Martínez - 2018 - In David Bain & Michael Brady, Philosophy of Pain: Unpleasantness, Emotion, and Deviance. New York: Routledge. pp. 13-26.
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  18.  8
    After Buddhism: Rethinking the Dharma for a Secular Age.Stephen Batchelor - 2015 - Yale University Press.
    Some twenty-five centuries after the Buddha started teaching, his message continues to inspire people across the globe, including those living in predominantly secular societies. But what does it mean to adapt religious practices to secular contexts? Stephen Batchelor, an internationally known author and teacher, is committed to a secularized version of the Buddha's teachings. The time has come, he feels, to articulate a coherent ethical, contemplative, and philosophical vision of Buddhism for our age. _After Buddhism, _the culmination of four (...)
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  19. Spinoza on Destroying Passions with Reason.Colin Marshall - 2012 - Philosophy and Phenomenological Research 85 (1):139-160.
    Spinoza claims we can control any passion by forming a more clear and distinct idea of it. The interpretive consensus is that Spinoza is either wrong or over-stating his view. I argue that Spinoza’s view is plausible and insightful. After breaking down Spinoza’s characterization of the relevant act, I consider four existing interpretations and conclude that each is unsatisfactory. I then consider a further problem for Spinoza: how his definitions of ‘action’ and ‘passion’ make room for passions becoming action. I (...)
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  20.  86
    Explanation in the science of consciousness: From the neural correlates of consciousness (NCCs) to the difference makers of consciousness.Colin Klein, Jakob Hohwy & Tim Bayne - 2020 - Philosophy and the Mind Sciences 1 (II).
    At present, the science of consciousness is structured around the search for the neural correlates of consciousness. One of the alleged advantages of the NCCs framework is its metaphysical neutrality—the fact that it begs no contested questions with respect to debates about the fundamental nature of consciousness. Here, we argue that even if the NCC framework is metaphysically neutral, it is structurally committed, for it presupposes a certain model—what we call the Lite-Brite model—of consciousness. This, we argue, represents a serious (...)
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  21. Why logical pluralism?Colin R. Caret - 2019 - Synthese 198 (Suppl 20):4947-4968.
    This paper scrutinizes the debate over logical pluralism. I hope to make this debate more tractable by addressing the question of motivating data: what would count as strong evidence in favor of logical pluralism? Any research program should be able to answer this question, but when faced with this task, many logical pluralists fall back on brute intuitions. This sets logical pluralism on a weak foundation and makes it seem as if nothing pressing is at stake in the debate. The (...)
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  22. “I Am the Original of All Objects”: Apperception and the Substantial Subject.Colin McLear - 2020 - Philosophers' Imprint 20 (26):1-38.
    Kant’s conception of the centrality of intellectual self-consciousness, or “pure apperception”, for scientific knowledge of nature is well known, if still obscure. Here I argue that, for Kant, at least one central role for such self-consciousness lies in the acquisition of the content of concepts central to metaphysical theorizing. I focus on one important concept, that of <substance>. I argue that, for Kant, the representational content of the concept <substance> depends not just on the capacity for apperception, but on the (...)
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  23. Biological function, adaptation, and natural design.Colin Allen & Marc Bekoff - 1995 - Philosophy of Science 62 (4):609-622.
    Recently something close to a consensus about the best way to naturalize the notion of biological function appears to be emerging. Nonetheless, teleological notions in biology remain controversial. In this paper we provide a naturalistic analysis for the notion of natural design. Many authors assume that natural design should be assimilated directly to function. Others find the notion problematic because it suggests that evolution is a directed process. We argue that both of these views are mistaken. Our naturalistic account does (...)
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  24. Reduction without reductionism: A defence of Nagel on connectability.Colin Klein - 2009 - Philosophical Quarterly 59 (234):39-53.
    Unlike the overall framework of Ernest Nagel's work on reduction, his theory of intertheoretic connection still has life in it. It handles aptly cases where reduction requires complex representation of a target domain. Abandoning his formulation as too liberal was a mistake. Arguments that it is too liberal at best touch only Nagel's deductivist theory of explanation, not his condition of connectability. Taking this condition seriously gives a powerful view of reduction, but one which requires us to index explanatory power (...)
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  25. Schopenhauer on the content of compassion.Colin Marshall - 2020 - Noûs 55 (4):782-799.
    On the traditional reading, Schopenhauer claims that compassion is the recognition of deep metaphysical unity. In this paper, I defend and develop the traditional reading. I begin by addressing three recent criticisms of that reading from Sandra Shapshay: that it fails to accommodate Schopenhauer's restriction to sentient beings, that it cannot explain his moral ranking of egoism over malice, and that Schopenhauer requires some level of distinction to remain in compassion. Against Shapshay, I argue that Schopenhauer does not restrict compassion (...)
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  26. Bayesianism and support by novel facts.Colin Howson - 1984 - British Journal for the Philosophy of Science 35 (3):245-251.
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  27. (1 other version)Consciousness and cosmology: Hyperdualism ventilated.Colin McGinn - 1993 - In Martin Davies & Glyn W. Humphreys, Consciousness: Philosophical and Psychological Essays. Cambridge, Mass., USA: Blackwell.
     
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  28. Philosophical issues in neuroimaging.Colin Klein - 2010 - Philosophy Compass 5 (2):186-198.
    Functional neuroimaging (NI) technologies like Positron Emission Tomography and functional Magnetic Resonance Imaging (fMRI) have revolutionized neuroscience, and provide crucial tools to link cognitive psychology and traditional neuroscientific models. A growing discipline of 'neurophilosophy' brings fMRI evidence to bear on traditional philosophical issues such as weakness of will, moral psychology, rational choice, social interaction, free will, and consciousness. NI has also attracted critical attention from psychologists and from philosophers of science. I review debates over the evidential status of fMRI, including (...)
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  29. Concept attribution in nonhuman animals: Theoretical and methodological problems in ascribing complex mental processes.Colin Allen & Marc D. Hauser - 1991 - Philosophy of Science 58 (2):221-240.
    The demise of behaviorism has made ethologists more willing to ascribe mental states to animals. However, a methodology that can avoid the charge of excessive anthropomorphism is needed. We describe a series of experiments that could help determine whether the behavior of nonhuman animals towards dead conspecifics is concept mediated. These experiments form the basis of a general point. The behavior of some animals is clearly guided by complex mental processes. The techniques developed by comparative psychologists and behavioral ecologists are (...)
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  30. Numbers can be just what they have to.Colin McLarty - 1993 - Noûs 27 (4):487-498.
  31. Regularity and infinitely tossed coins.Colin Howson - 2017 - European Journal for Philosophy of Science 7 (1):97-102.
    Timothy Williamson has claimed to prove that regularity must fail even in a nonstandard setting, with a counterexample based on tossing a fair coin infinitely many times. I argue that Williamson’s argument is mistaken, and that a corrected version shows that it is not regularity which fails in the non-standard setting but a fundamental property of shifts in Bernoulli processes.
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  32. Judgements, facts and propositions: theories of truth in Russell, Wittgenstein and Ramsey.Colin Johnston & Peter Sullivan - 2018 - In Michael Glanzberg, The Oxford Handbook of Truth. Oxford, United Kingdom: Oxford University Press. pp. 150-192.
    In 'On the nature of truth and falsehood' Russell offers both a multiple relation theory of judgment and a correspondence theory of truth. It has been a prevailing understanding of the Tractatus that Wittgenstein rejects Russell’s multiple relation idea but endorses the correspondence theory. Ramsey took the opposite view. In his 'Facts and Propositions', Ramsey endorses Russell’s multiple relation idea, rejects the correspondence theory, and then asserts that these moves are both due to Wittgenstein. This chapter will argue that Ramsey’s (...)
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  33. Deciphering animal pain.Colin Allen - 2005 - In Murat Aydede, Pain: New Essays on its Nature and the Methodology of its Study. MIT Press.
    In this paper we1 assess the potential for research on nonhuman animals to address questions about the phenomenology of painful experiences. Nociception, the basic capacity for sensing noxious stimuli, is widespread in the animal kingdom. Even rel- atively primitive animals such as leeches and sea slugs possess nociceptors, neurons that are functionally specialized for sensing noxious stimuli (Walters 1996). Vertebrate spinal cords play a sophisticated role in processing and modulating nociceptive signals, providing direct control of some motor responses to noxious (...)
     
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  34. The uses and abuses of the history of topos theory.Colin Mclarty - 1990 - British Journal for the Philosophy of Science 41 (3):351-375.
    The view that toposes originated as generalized set theory is a figment of set theoretically educated common sense. This false history obstructs understanding of category theory and especially of categorical foundations for mathematics. Problems in geometry, topology, and related algebra led to categories and toposes. Elementary toposes arose when Lawvere's interest in the foundations of physics and Tierney's in the foundations of topology led both to study Grothendieck's foundations for algebraic geometry. I end with remarks on a categorical view of (...)
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  35. The Dual Track Theory of Moral Decision-Making: a Critique of the Neuroimaging Evidence.Colin Klein - 2010 - Neuroethics 4 (2):143-162.
    The dual-track theory of moral reasoning has received considerable attention due to the neuroimaging work of Greene et al. Greene et al. claimed that certain kinds of moral dilemmas activated brain regions specific to emotional responses, while others activated areas specific to cognition. This appears to indicate a dissociation between different types of moral reasoning. I re-evaluate these claims of specificity in light of subsequent empirical work. I argue that none of the cortical areas identified by Greene et al. are (...)
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  36.  87
    Topic Modeling Reveals Distinct Interests within an Online Conspiracy Forum.Colin Klein, Peter Clutton & Vince Polito - 2018 - Frontiers in Psychology 9.
    Conspiracy theories play a troubling role in political discourse. Online forums provide a valuable window into everyday conspiracy theorizing, and can give a clue to the motivations and interests of those who post in such forums. Yet this online activity can be difficult to quantify and study. We describe a unique approach to studying online conspiracy theorists which used non-negative matrix factorization to create a topic model of authors' contributions to the main conspiracy forum on Reddit. This subreddit provides a (...)
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  37. Intuition and Presence.Colin McLear - 2017 - In Andrew Stephenson & Anil Gomes, Kant and the Philosophy of Mind: Perception, Reason, and the Self. Oxford, United Kingdom: Oxford University Press. pp. 86-103.
    In this paper I explicate the notion of “presence” [Gegenwart] as it pertains to intuition. Specifically, I examine two central problems for the position that an empirical intuition is an immediate relation to an existing particular in one’s environment. The first stems from Kant’s description of the faculty of imagination, while the second stems from Kant’s discussion of hallucination. I shall suggest that Kant’s writings indicate at least one possible means of reconciling our two problems with a conception of “presence” (...)
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  38. Kantian Conceptualism/Nonconceptualism.Colin McLear - 2020 - Stanford Encyclopedia of Philosophy.
    Overview of the (non)conceptualism debate in Kant studies.
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  39. Fish Cognition and Consciousness.Colin Allen - 2013 - Journal of Agricultural and Environmental Ethics 26 (1):25-39.
    Questions about fish consciousness and cognition are receiving increasing attention. In this paper, I explain why one must be careful to avoid drawing conclusions too hastily about this hugely diverse set of species.
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  40.  50
    (1 other version)Transduction, Calibration, and the Penetrability of Pain.Colin Klein - 2023 - Ergo: An Open Access Journal of Philosophy 10.
    Pains are subject to obvious, well-documented, and striking top-down influences. This is in stark contrast to visual perception, where the debate over cognitive penetrability tends to revolve around fairly subtle experimental effects. Several authors have recently taken up the question of whether top-down effects on pain count as cognitive penetrability, and what that might show us about traditional debates. I review some of the known mechanisms for top-down modulation of pain, and suggest that it reveals an issue with a relatively (...)
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  41. The Penumbral Theory of Masochistic Pleasure.Colin Klein - 2014 - Review of Philosophy and Psychology 5 (1):41-55.
    Being whipped, getting a deep-tissue massage, eating hot chili peppers, running marathons, and getting tattooed are all painful. Sometimes they are also pleasant—or so many people claim. Masochistic pleasure consists in finding such experiences pleasant in addition to, and because of, the pain. Masochistic pleasure presents a philosophical puzzle. Pains hurt, they feel bad, and are aversive. Pleasures do the opposite. Thus many assume that the idea of a pleasant pain is downright unintelligible. I disagree. I claim that cases of (...)
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  42. Schopenhauer and Non-Cognitivist Moral Realism.Colin Marshall - 2017 - Journal of the History of Philosophy 55 (2):293-316.
    I argue that Schopenhauer’s views on the foundations of morality challenge the widely-held belief that moral realism requires cognitivism about moral judgments. Schopenhauer’s core metaethical view consists of two claims: that moral worth is attributed to actions based in compassion, and that compassion, in contrast to egoism, arises from deep metaphysical insight into the non-distinctness of beings. These claims, I argue, are sufficient for moral realism, but are compatible with either cognitivism or non-cognitivism. While Schopenhauer’s views of moral judgment are (...)
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  43. Imperatives, phantom pains, and hallucination by presupposition.Colin Klein - 2012 - Philosophical Psychology 25 (6):917-928.
    Several authors have recently argued that the content of pains (and bodily sensations more generally) is imperative rather than descriptive. I show that such an account can help resolve competing intuitions about phantom limb pain. As imperatives, phantom pains are neither true nor false. However, phantom limb pains presuppose falsehoods, in the same way that any imperative which demands something impossible presupposes a falsehood. Phantom pains, like many chronic pains, are thus commands that cannot be satisfied. I conclude by showing (...)
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  44. The last mathematician from Hilbert's göttingen: Saunders Mac Lane as philosopher of mathematics.Colin McLarty - 2007 - British Journal for the Philosophy of Science 58 (1):77-112.
    While Saunders Mac Lane studied for his D.Phil in Göttingen, he heard David Hilbert's weekly lectures on philosophy, talked philosophy with Hermann Weyl, and studied it with Moritz Geiger. Their philosophies and Emmy Noether's algebra all influenced his conception of category theory, which has become the working structure theory of mathematics. His practice has constantly affirmed that a proper large-scale organization for mathematics is the most efficient path to valuable specific results—while he sees that the question of which results are (...)
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  45. Rationality: What difference does it make?Colin McLear - 2023 - Philosophy and Phenomenological Research 107 (1):1-26.
    A variety of interpreters have argued that Kant construes the animality of human beings as ‘transformed’, in some sense, through the possession of rationality. I argue that this interpretation admits of multiple readings and that it is either wrong, or doesn't result in the conclusion for which its proponents argue. I also explain the sense in which rationality nevertheless significantly differentiates human beings from other animals.
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  46. Frege, the self-consciousness of judgement, and the indefinability of truth.Colin Johnston - 2021 - British Journal for the History of Philosophy 29 (6):1124-1143.
    ABSTRACT Frege characterizes judgement as the acknowledgement of the truth of a thought, appearing thereby to rule out false judgement. First in this paper I explain Frege’s characterization so that it does not have this consequence. Frege is not saying that for a subject S to judge that p is for S to acknowledge the truth of the thought that p. Rather, he is articulating judgement’s nature within self-consciousness. From within, to judge means to acknowledge a truth. Second, I suggest (...)
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  47. The Mind and the Body as 'One and the Same Thing' in Spinoza.Colin R. Marshall - 2009 - British Journal for the History of Philosophy 17 (5):897-919.
    I argue that, contrary to how he is often read, Spinoza did not believe that the mind and the body were numerically identical. This means that we must find some alternative reading for his claims that they are 'one and the same thing'.
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  48.  39
    Elementary Categories, Elementary Toposes.Colin McLarty - 1991 - Oxford, England: Oxford University Press.
    Now available in paperback, this acclaimed book introduces categories and elementary toposes in a manner requiring little mathematical background. It defines the key concepts and gives complete elementary proofs of theorems, including the fundamental theorem of toposes and the sheafification theorem. It ends with topos theoretic descriptions of sets, of basic differential geometry, and of recursive analysis.
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  49. A logic of induction.Colin Howson - 1997 - Philosophy of Science 64 (2):268-290.
    In this paper, I present a simple and straightforward logic of induction: a consequence relation characterized by a proof theory and a semantics. This system will be called LI. The premises will be restricted to, on the one hand, a set of empirical data and, on the other hand, a set of background generalizations. Among the consequences will be generalizations as well as singular statements, some of which may serve as predictions and explanations.
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  50. Is anyone a cognitive ethologist?Colin Allen - 2004 - Biology and Philosophy 19 (4):589-607.
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